%%%%%%%%% \iffalse meta-comment
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% Copyright (C) 2018 by Jeffrey B. Arnold <jeffrey.arnold@gmail.com>
% ---------------------------------------------------------------------------
% This work may be distributed and/or modified under the
% conditions of the LaTeX Project Public License, either version 1.3
% of this license or (at your option) any later version.
% The latest version of this license is in
% http://www.latex-project.org/lppl.txt
% and version 1.3 or later is part of all distributions of LaTeX
% version 2005/12/01 or later.
%
% This work has the LPPL maintenance status `maintained'.
%
% The Current Maintainer of this work is Jeffrey B. Arnold.
%
% This work consists of the files lstbayes.dtx and lstbayes.ins
% and the derived filebase lstbayes.sty.
%
% \fi
%
% \iffalse
%<*driver>
\ProvidesFile{lstbayes.dtx}
%</driver>
%<package>\NeedsTeXFormat{LaTeX2e}[1999/12/01]
%<package>\ProvidesPackage{lstbayes}
%<*package>
[2018/07/06 lstbayes listings language drivers for BUGS, JAGS, and Stan]
%</package>
%
%<*driver>
\documentclass{ltxdoc}
\usepackage{lstbayes}
\usepackage{hyperref}
\EnableCrossrefs
\CodelineIndex
\RecordChanges
\begin{document}
\DocInput{lstbayes.dtx}
\PrintChanges
\PrintIndex
\end{document}
%</driver>
% \fi
%
% \CheckSum{12}
%
% \CharacterTable
% {Upper-case \A\B\C\D\E\F\G\H\I\J\K\L\M\N\O\P\Q\R\S\T\U\V\W\X\Y\Z
% Lower-case \a\b\c\d\e\f\g\h\i\j\k\l\m\n\o\p\q\r\s\t\u\v\w\x\y\z
% Digits \0\1\2\3\4\5\6\7\8\9
% Exclamation \! Double quote \" Hash (number) \#
% Dollar \$ Percent \% Ampersand \&
% Acute accent \' Left paren \( Right paren \)
% Asterisk \* Plus \+ Comma \,
% Minus \- Point \. Solidus \/
% Colon \: Semicolon \; Less than \<
% Equals \= Greater than \> Question mark \?
% Commercial at \@ Left bracket \[ Backslash \\
% Right bracket \] Circumflex \^ Underscore \_
% Grave accent \` Left brace \{ Vertical bar \|
% Right brace \} Tilde \~}
%
%
% \changes{2015-09-26}{2015/09/26}{Converted to DTX file}
% \changes{2015-09-27}{2015/09/27}{Fix README}
% \changes{2015-09-28}{2015/09/27}{Fix README. Add keywords for all built-in functions that are in Stan v2.8.0.}
%
% \DoNotIndex{\newcommand,\newenvironment}
%
% \providecommand*{\url}{\texttt}
% \GetFileInfo{lstbayes.dtx}
% \title{The \textsf{lstbayes} package}
% \author{Jeffrey B. Arnold \\ \url{jeffrey.arnold@gmail.com}}
% \date{\fileversion~from \filedate}
%
% \maketitle
%
% \section{Introduction}
%
% This package provides language drivers for the \href{https://www.ctan.org/tex-archive/macros/latex/contrib/listings/}{\textsf{listings}} package for the several Bayesian modeling languages: BUGS, JAGS, and Stan.
%
% \section{Usage}
%
% % See the documentation of the \textsf{listings} package.
%
%
% \StopEventually{}
%
% \section{Implementation}
%
% \iffalse
%<*package>
% \fi
%
% \begin{macrocode}
\RequirePackage{listings}
% \end{macrocode}
%
% \subsection{BUGS}
%
% Language driver for BUGS, including \href{http://www.openbugs.net/w/FrontPage}{WinBUGS} and \href{http://openbugs.net}{OpenBUGS}.
% The driver is based on \href{http://www.openbugs.net/Manuals/Manual.html}{OpenBUGS v. 3.2.3}.
%
% \begin{macrocode}
\lstdefinelanguage{BUGS}{
morekeywords=[1]{for,in,model,T,I,C},%
morecomment=[l]{\#},%
sensitive=true,%
alsoletter={.},%
otherkeywords={<-,~},%
literate={<-}{{$\leftarrow$}}1 {~}{{$\sim$}}1%
}
\lstalias[]{OpenBUGS}[]{BUGS}
\lstalias[]{WinBUGS}[]{BUGS}
% \end{macrocode}
%
% \subsection{JAGS}
%
% Language driver for \href{http://mcmc-jags.sourceforge.net/}{JAGS}.
% The driver is based on JAGS version 3.4.0 (Sept 4, 2013).
%
%
% \begin{macrocode}
\lstdefinelanguage[]{JAGS}[]{BUGS}{
morekeywords=[1]{data,var,const},%
morecomment=[n]{/*}{*/}%
}
% \end{macrocode}
%
% \subsection{Stan}
%
% Language driver for \href{http://mc-stan.org/}{Stan}.
% The driver is based on Stan modeling language version \href{https://github.com/stan-dev/stan/releases/download/v2.17.0/stan-reference-2.17.0.pdf}{2.17.0}.
%
% \begin{macrocode}
\lstdefinelanguage{Stan}{
morekeywords=[1]{%
functions,%
data,%
else,%
for,%
generated,%
if,%
in,%
increment_log_prob,%
integrate_ode_bdf,%
integrate_ode_rk45,%
integrate_ode,%
lower,%
model,%
parameters,%
print,%
quantities,%
reject,%
return,%
T,%
target,%
transformed,%
upper,%
while%
},%
morekeywords=[2]{%
cholesky_factor_corr,%
cholesky_factor_cov,%
corr_matrix,%
cov_matrix,%
int,%
matrix,%
ordered,%
positive_ordered,%
real,%
row_vector,%
simplex,%
unit_vector,%
vector,%
void%
},%
morekeywords=[3]{%
Phi,%
Phi_approx,%
abs,%
acos,%
acosh,%
algebra_solver,%
append_array,%
append_col,%
append_row,%
asin,%
asinh,%
atan,%
atan2,%
atanh,%
bernoulli,%
bernoulli_cdf,%
bernoulli_lccdf,%
bernoulli_lcdf,%
bernoulli_logit,%
bernoulli_logit_lpmf,%
bernoulli_logit_rng,%
bernoulli_lpmf,%
bernoulli_rng,%
bessel_first_kind,%
bessel_second_kind,%
beta,%
beta_binomial,%
beta_binomial_cdf,%
beta_binomial_lccdf,%
beta_binomial_lcdf,%
beta_binomial_lpmf,%
beta_binomial_rng,%
beta_cdf,%
beta_lccdf,%
beta_lcdf,%
beta_lpdf,%
beta_rng,%
binary_log_loss,%
binomial,%
binomial_cdf,%
binomial_coefficient_log,%
binomial_lccdf,%
binomial_lcdf,%
binomial_logit,%
binomial_logit_lpmf,%
binomial_lpmf,%
binomial_rng,%
block,%
categorical,%
categorical_logit,%
categorical_logit_lpmf,%
categorical_logit_rng,%
categorical_lpmf,%
categorical_rng,%
cauchy,%
cauchy_cdf,%
cauchy_lccdf,%
cauchy_lcdf,%
cauchy_lpdf,%
cauchy_rng,%
cbrt,%
ceil,%
chi_square,%
chi_square_cdf,%
chi_square_lccdf,%
chi_square_lcdf,%
chi_square_lpdf,%
chi_square_rng,%
cholesky_decompose,%
choose,%
col,%
cols,%
columns_dot_product,%
columns_dot_self,%
cos,%
cosh,%
cov_exp_quad,%
crossprod,%
csr_extract_u,%
csr_extract_v,%
csr_extract_w,%
csr_matrix_times_vector,%
csr_to_dense_matrix,%
cumulative_sum,%
determinant,%
diag_matrix,%
diag_post_multiply,%
diag_pre_multiply,%
diagonal,%
digamma,%
dims,%
dirichlet,%
dirichlet_lpdf,%
dirichlet_rng,%
distance,%
dot_product,%
dot_self,%
double_exponential,%
double_exponential_cdf,%
double_exponential_lccdf,%
double_exponential_lcdf,%
double_exponential_lpdf,%
double_exponential_rng,%
e,%
eigenvalues_sym,%
eigenvectors_sym,%
erf,%
erfc,%
exp,%
exp2,%
exp_mod_normal,%
exp_mod_normal_cdf,%
exp_mod_normal_lccdf,%
exp_mod_normal_lcdf,%
exp_mod_normal_lpdf,%
exp_mod_normal_rng,%
expm1,%
exponential,%
exponential_cdf,%
exponential_lccdf,%
exponential_lcdf,%
exponential_lpdf,%
exponential_rng,%
fabs,%
falling_factorial,%
fdim,%
floor,%
fma,%
fmax,%
fmin,%
fmod,%
frechet,%
frechet_cdf,%
frechet_lccdf,%
frechet_lcdf,%
frechet_lpdf,%
frechet_rng,%
gamma,%
gamma_cdf,%
gamma_lccdf,%
gamma_lcdf,%
gamma_lpdf,%
gamma_p,%
gamma_q,%
gamma_rng,%
gaussian_dlm_obs,%
gaussian_dlm_obs_lpdf,%
get_lp,%
gumbel,%
gumbel_cdf,%
gumbel_lccdf,%
gumbel_lcdf,%
gumbel_lpdf,%
gumbel_rng,%
head,%
hypergeometric,%
hypergeometric_lpmf,%
hypergeometric_rng,%
hypot,%
inc_beta,%
int_step,%
integrate_ode,%
integrate_ode_bdf,%
integrate_ode_rk45,%
inv,%
inv_Phi,%
inv_chi_square,%
inv_chi_square_cdf,%
inv_chi_square_lccdf,%
inv_chi_square_lcdf,%
inv_chi_square_lpdf,%
inv_chi_square_rng,%
inv_cloglog,%
inv_gamma,%
inv_gamma_cdf,%
inv_gamma_lccdf,%
inv_gamma_lcdf,%
inv_gamma_lpdf,%
inv_gamma_rng,%
inv_logit,%
inv_sqrt,%
inv_square,%
inv_wishart,%
inv_wishart_lpdf,%
inv_wishart_rng,%
inverse,%
inverse_spd,%
is_inf,%
is_nan,%
lbeta,%
lchoose,%
lgamma,%
lkj_corr,%
lkj_corr_cholesky,%
lkj_corr_cholesky_lpdf,%
lkj_corr_cholesky_rng,%
lkj_corr_lpdf,%
lkj_corr_rng,%
lmgamma,%
lmultiply,%
log,%
log10,%
log1m,%
log1m_exp,%
log1m_inv_logit,%
log1p,%
log1p_exp,%
log2,%
log_determinant,%
log_diff_exp,%
log_falling_factorial,%
log_inv_logit,%
log_mix,%
log_rising_factorial,%
log_softmax,%
log_sum_exp,%
logistic,%
logistic_cdf,%
logistic_lccdf,%
logistic_lcdf,%
logistic_lpdf,%
logistic_rng,%
logit,%
lognormal,%
lognormal_cdf,%
lognormal_lccdf,%
lognormal_lcdf,%
lognormal_lpdf,%
lognormal_rng,%
machine_precision,%
matrix_exp,%
max,%
mdivide_left_spd,%
mdivide_left_tri_low,%
mdivide_right_spd,%
mdivide_right_tri_low,%
mean,%
min,%
modified_bessel_first_kind,%
modified_bessel_second_kind,%
multi_gp,%
multi_gp_cholesky,%
multi_gp_cholesky_lpdf,%
multi_gp_lpdf,%
multi_normal,%
multi_normal_cholesky,%
multi_normal_cholesky_lpdf,%
multi_normal_cholesky_rng,%
multi_normal_lpdf,%
multi_normal_prec,%
multi_normal_prec_lpdf,%
multi_normal_rng,%
multi_student_t,%
multi_student_t_lpdf,%
multi_student_t_rng,%
multinomial,%
multinomial_lpmf,%
multinomial_rng,%
multiply_log,%
multiply_lower_tri_self_transpose,%
neg_binomial,%
neg_binomial_2,%
neg_binomial_2_cdf,%
neg_binomial_2_lccdf,%
neg_binomial_2_lcdf,%
neg_binomial_2_log,%
neg_binomial_2_log_lpmf,%
neg_binomial_2_log_rng,%
neg_binomial_2_lpmf,%
neg_binomial_2_rng,%
neg_binomial_cdf,%
neg_binomial_lccdf,%
neg_binomial_lcdf,%
neg_binomial_lpmf,%
neg_binomial_rng,%
negative_infinity,%
normal,%
normal_cdf,%
normal_lccdf,%
normal_lcdf,%
normal_lpdf,%
normal_rng,%
not_a_number,%
num_elements,%
ordered_logistic,%
ordered_logistic_lpmf,%
ordered_logistic_rng,%
owens_t,%
pareto,%
pareto_cdf,%
pareto_lccdf,%
pareto_lcdf,%
pareto_lpdf,%
pareto_rng,%
pareto_type_2,%
pareto_type_2_cdf,%
pareto_type_2_lccdf,%
pareto_type_2_lcdf,%
pareto_type_2_lpdf,%
pareto_type_2_rng,%
pi,%
poisson,%
poisson_cdf,%
poisson_lccdf,%
poisson_lcdf,%
poisson_log,%
poisson_log_lpmf,%
poisson_log_rng,%
poisson_lpmf,%
poisson_rng,%
positive_infinity,%
pow,%
print,%
prod,%
qr_Q,%
qr_R,%
quad_form,%
quad_form_diag,%
quad_form_sym,%
rank,%
rayleigh,%
rayleigh_cdf,%
rayleigh_lccdf,%
rayleigh_lcdf,%
rayleigh_lpdf,%
rayleigh_rng,%
reject,%
rep_array,%
rep_matrix,%
rep_row_vector,%
rep_vector,%
rising_factorial,%
round,%
row,%
rows,%
rows_dot_product,%
rows_dot_self,%
scaled_inv_chi_square,%
scaled_inv_chi_square_cdf,%
scaled_inv_chi_square_lccdf,%
scaled_inv_chi_square_lcdf,%
scaled_inv_chi_square_lpdf,%
scaled_inv_chi_square_rng,%
sd,%
segment,%
sin,%
singular_values,%
sinh,%
size,%
skew_normal,%
skew_normal_cdf,%
skew_normal_lccdf,%
skew_normal_lcdf,%
skew_normal_lpdf,%
skew_normal_rng,%
softmax,%
sort_asc,%
sort_desc,%
sort_indices_asc,%
sort_indices_desc,%
sqrt,%
sqrt2,%
square,%
squared_distance,%
step,%
student_t,%
student_t_cdf,%
student_t_lccdf,%
student_t_lcdf,%
student_t_lpdf,%
student_t_rng,%
sub_col,%
sub_row,%
sum,%
tail,%
tan,%
tanh,%
target,%
tcrossprod,%
tgamma,%
to_array_1d,%
to_array_2d,%
to_matrix,%
to_row_vector,%
to_vector,%
trace,%
trace_gen_quad_form,%
trace_quad_form,%
trigamma,%
trunc,%
uniform,%
uniform_cdf,%
uniform_lccdf,%
uniform_lcdf,%
uniform_lpdf,%
uniform_rng,%
variance,%
von_mises,%
von_mises_lpdf,%
von_mises_rng,%
weibull,%
weibull_cdf,%
weibull_lccdf,%
weibull_lcdf,%
weibull_lpdf,%
weibull_rng,%
wiener,%
wiener_lpdf,%
wishart,%
wishart_lpdf,%
wishart_rng
},%
otherkeywords={.*=,./=,+=,-=,*=,/=,<-,~},%
sensitive=true,%
morecomment=[l]{\#},%
morecomment=[l]{//},%
morecomment=[n]{/*}{*/},%
string=[d]"%,
literate={<-}{{$\leftarrow$}}1 {~}{{$\sim$}}1%
}
% \end{macrocode}
%
% \iffalse
%</package>
% \fi
%
% \Finale